Brian Logue Research Lab
Research Interests
- Advanced Chemical and Biological Threat Detection: Developing analytical methods and sensors to identify chemical warfare agents and their long-lived biomarkers in challenging biological matrices like blood, urine and hair.
- Innovative Sample Preparation for Environmental Analysis: Creating and refining ICECLES, a novel technique that enables ultratrace detection of contaminants in drinking water by merging freeze concentration with sorptive extraction.
Research Details
The overarching themes of my research are bioanalytical chemistry, sample preparation and materials/organic chemistry. The bioanalytical research focuses on the detection of chemical and biological warfare agents or toxic environmental contaminants via their chemical or biological signatures. The materials/organic chemistry portion of the large group focuses on the development of functionalized carboxylate deposition (a novel surface bonding chemistry developed in the large group) as it pertains to chromatography and dye-sensitized solar cells. The sample preparation portion of the group is developing ICECLES (ICE Concentration Linked with Extractive Stirrer). Current and future projects include research in chemical and biological warfare agent detection, environmental contaminant analysis, sensor development and the analysis of flavor compounds via ICECLES.
Determining past exposure to chemical and biological warfare agents in biological matrices is difficult because the "window of detection" of most chemical agents is very short. In the human body, the upper residence time for most metabolites of most chemical agents is approximately five days. To address this problem, research in the discovery of metabolites (i.e., products of the conversion of chemicals through normal biological processes in an organism) with longer residence times can be pursued and analytical methods developed to analyze those metabolites. One current project focuses on analysis of a promising, little-studied cyanide metabolite in blood and urine for verification of past exposure to cyanide. Alternatively to finding novel metabolites, a matrix that stores and protects currently known metabolites would allow a longer window of detection. Hair has shown great promise in its ability to address this problem as metabolites get trapped in the hair matrix and are protected from degradation. Therefore, we may be able to greatly extend the window of detection of chemical and biological warfare agent exposure. Another project in the area is the development of a fluorometric sensor for the diagnosis of cyanide exposure.
The ability to analyze contaminants at 鈥渦ltratrace鈥 concentrations [defined as ng/L to pg/L, commonly referred to as parts-per-trillion (ppt) and parts-per-quadrillion (ppq), respectively] is a critically important, but currently challenging, aspect of ensuring safe drinking water. The Environmental Protection Agency Maximum Contaminant Level Goal is zero for several compounds; however, the enforceable contaminant level, called the Maximum Contaminant Level, is set, in part, according to "鈥 the ability of laboratories to measure accurately and consistently the level of the contaminant with available analytical methods." This typically limits Maximum Contaminant Levels to the parts-per-billion (ppb) (渭g/L) range. Our recently discovered technique, coined ICECLES, has the potential to more easily allow ultratrace analysis of compounds important to drinking water safety. ICECLES combines the highly complementary techniques of stir bar sorptive extraction with freeze concentration. In freeze concentration, solutes are concentrated based on the direct relationship between freezing point depression and solute molality. If a solution is slowly frozen (typically with vigorous stirring), then local regions of solvent with a low solute concentration are frozen first: the solution left behind is more concentrated. Combining freeze concentration and stir bar sorptive extraction into ICECLES has produced compelling preliminary findings, including pg/mL limits of detection and >1,000-fold signal increases compared to stir bar sorptive extraction. ICECLES is likely to enable ultratrace analysis of analytes that currently cannot easily be analyzed at the desired concentrations (e.g., Maximum Contaminant Levels). Research Experiences for Undergraduates students involved in the project will develop methods of analysis to determine ultratrace concentrations of toxic compounds from drinking water using the ICECLES sample preparation technique. During the Research Experiences for Undergraduates project, students will gain knowledge in this innovative technique but will also gain experience with fundamental analytical principles, stir bar sorptive extraction and gas-chromatography mass-spectrometry.
Research on solar energy is extremely timely and important to our future. If properly harnessed, solar energy could provide enough power for world consumption many times over. The problem lies in converting this energy cheaply into a usable form. Currently, solid state crystalline silicon solar cells are used in most applications. They are very expensive to produce and do not harness the entire spectrum of solar energy. A type of solar cell called a dye-sensitized solar cell has been developed that does not use the high purity silicon of traditional solar cells. Therefore, these cells have the possibility of low cost production. Our group is interested in developing novel dye molecules and cell designs to increase the efficiency and robustness of dye-sensitized solar cells. Success could greatly increase efficiencies of these cells, which would reduce the cost of the energy produced.
In light of recent events, our research in the field of chemical and toxic agent detection, as well as research in surface modification and ICECLES development, is very timely and exciting. Our research is directly applicable to the welfare of human beings and the environment that we live in, making this work very relevant our own lives in the 21st century.
This program is designed to encourage the development of a mentoring relationship between undergraduate students and 日本av视频 faculty. The program provides a mentorship (scholarship) of $2,500 for summer study involving original, scholarly activity as described in the guidelines of the program. The awards will be competitive and based on the design of the proposed studies and likelihood of meeting the objectives of the applicant. This program is only for 日本av视频 students.
There are a variety of national programs that can be used to fund undergraduate research. The National Science Foundation Research Experiences for Undergraduates is the main program. Logue is currently involved in an REU called Security Printing and Anticounterfeit Technologies (SPACT). They have two open spots per year for the next few years. Check the website for details on the program.
Multiple submitted proposals have designated funding for undergraduate research. If the opportunities listed do not apply, there is still a chance that funding is available.
Normally graduate students start on teaching assistantships in which the graduate student has a significant teaching load (usually instructing laboratory sections). Acceptance to graduate studies in the department is the only requirement for securing a teaching assistantship. Contact Logue for further information.
This type of assistantship is contingent on external funding. Logue has multiple submitted proposals in which funding is designated for graduate students.
- Multiple submitted proposals have designated funding for postdoctoral research personnel. Funding for these positions is contingent on the agency awarding funding for the project.
- Other opportunities to work with Logue are available through a number of centers in which Logue is a member.
Dedicated Equipment
- Agilent GCMS system with Gerstel Multiple Sampling System. Agilent 5975C mass spectrometer and 7890 gas chromatograph. MPS sampler configured for thermal desorption, headspace, twister and liquid sampling.
- Agilent GCMS system with autosampler. Agilent 5975 inert source mass spectrometric detector with Agilent 6890 gas chromatograph.
- Agilent 1200 HPLC system with (left stack from bottom to top) quaternary pump, membrane degasser, solvent tray, (right stack bottom to top) chiller, autosampler, multiwavelength UV detector and fluorometer.
- Agilent 1100 HPLC system with (from bottom to top) fluorescence detector, multiwavelength UV-Vis detector, autosampler, quaternary pump, membrane degasser and solvent tray.
- Metrohm IC system with (from left to right and top to bottom) autosampler, column compartment, conductivity detector, interface, pump and suppressor module.
- Horiba Scientific Fluoromax-4 spectrofluorometer.
- Raman Systems R3000-QE portable Raman spectrometer with fiber optic probe.
- Gamry Reference-600 Potentiostat for electrochemical analysis.
- Labconco centrifugal evaporation system with cold trap (right module).
- Jasco UV-Vis spectrophotometer.
- Glove box (six feet).
- Labconco Waterpro PS analytical grade water purification system.
- Fisher brand -40 C upright freezer.
- Revco brand -80 C upright freezer.
- Large refrigerator/freezer unit.
- Solid phase microextraction apparatus.
- Solid phase extraction vacuum manifold.
- AND brand analytical balance.
- Fiber optic illuminator for DSSCs.
- Variety of multimeters (i.e., handheld and desktop).
- Variety of sample preparation equipment: shakers/vortex mixers, block heaters, microcentrifuge, pH meter, nitrogen evaporators, pipets, sonicators, rotary evaporators, homogenizer and hot plates.
- Large glassware oven.
Departmental Equipment (available after initial training)
- AB SCIEX 5500 Q-trap LCMSMS system with a Shimadzu Prominence UHPLC system.
- AB SCIEX Q-star (Q-TOF) mass spectrometer.
- Thermo LTQ.
- Kratos high-resolution mass spectrometer with GC, HPLC, pyrolysis, FAB and continuous-flow FAB sample introduction capabilities and EI, CI or FAB sample ionization capabilities, positive- or negative-ion detection capabilities and an ESI-FTMS and MALDI-TOF mass spectrometers.
- Varian Saturn GC/MS system with EI and CI capabilities.
- A spectroscopy lab with near-, mid- and far-IR capabilities, including DRIFT and CIR sample presentation capabilities, fluorescence and time-resolved fluorescence spectrometers and scanning and diode-array UV-Vis spectrophotometers.
- Two solid-sate NMR spectrometers: a 200 MHz spectrometer and a 400 MHz spectrometer with variable-temperature probe.
- 200 MHz and 400 MHz high-resolution solution NMRs.
Accessible Equipment (from collaborations)
- Scanning electron microscope (Hitachi S3400N-II). Can image at high vacuum and subatmospheric pressure. Can image features of 3 nm under ideal conditions. EDX attachment that can take elemental profiles of SEM images.
- Atomic force microscopes (Park Scientific AutoProbe CP and an Agilent System). Can image features of 1 nm and is capable of imaging solid samples in contact, noncontact and intermittent contact modes.
- Automated Dionex accelerated solvent extraction systems (2) and a supercritical fluid extraction system.
- Rainin gradient HPLC systems (2) with radiochemical, refractive index, fluorescence and UV-Vis detectors.
- Size-exclusion chromatograph with an evaporative light scattering detector.
- Micro/nanoelectronics fabrication facility.
- Agilent UV-Vis spectrophotometer.
- Thermo Nicholet IR system.
- Micromeritics ASAP 2000 surface area analyzer.
Facilities
- Three laboratories (480 square feet each).
- Nine dedicated laboratory computers.
- Eight fume hoods.
- National Science Foundation
- Department of Defense/Department of the Army
- National Institutes of Health
Current Funding (ca. $3.83 million)
- 鈥淐ollaborative Research: NRT: Cyber-Physical-Social System for Understanding and Thwarting the Illicit Economy,鈥 NSF, principal investigator on collaborative grant, $540,085 (September 2018-August 2023).
- "Analysis of Dimethyl Trisulfide for a Pharmacokinetic Study,鈥 Southwest Research Institute, principal investigator, $9,754. Logue will execute 100% of the budget (September 2017-August 2018).
- 鈥淒evelopment of Antidotes for Toxic Gases (co-PI),鈥 NIH, subaward principal investigator, $754,534 (subaward budget split into two projects). Logue will execute 100% of the subaward budget (September 2016-August 2021).
- 鈥淐yanalyzer: A Medical Laboratory Device for the Rapid Diagnosis of Cyanide Exposure,鈥 NIH Small Business Innovation Research Grant, co-principal investigator, $734,592. Logue will execute 100% of this budget (September 2016-2018).
- 鈥淐orrelation of Sulfur Mustard Exposure with Sulfur Mustard Metabolites: Development of Analysis Methods and Evaluation of Dose Response Behavior,鈥 (BARDA), principal investigator, $157,985. Logue will execute 100% of the budget (July 2016-June 2017).
- 鈥淩EU Site: Security Printing and Anti-Counterfeiting Technology,鈥 NSF, principal investigator on collaborative grant, $91,939 of $536,840 total project. Logue oversees 17% of the total SPACT REU budget (March 2016-2019).
- 鈥淪urface Engineering Research Center,鈥 proposal for the South Dakota Board of Regents Fiscal Year 2017 Research and Development Grant, 日本av视频 campus coordinator, $900,000 total. Logue oversees 33% ($300,000) of the budget and will directly execute approximately 20% of the proposed budget (July 2016-2018).
Past Funding (Executed ca. $5.37 million as Principal Investigator or Co-Principal Investigator, to 2015)
- 鈥淐yanalyzer: A Medical Laboratory Device for the Rapid Diagnosis of Cyanide Exposure Associated with Konzo and Tropical Ataxic Neuropathy,鈥 Sanford Health/SDBOR, principal investigator, $61,490. Logue will execute 100% of the budget (August 2016-August 2018).
- 鈥淎nalysis of Cyanide, Its Metabolites, and Next-Generation Cyanide Antidotes,鈥 DoD/NIH, principal investigator, $350,000. Logue will execute 100% of the budget (September 2016-2018).
- 鈥淎nalysis of Dimethyl Trisulfide for a Pharmacokinetic Study,鈥 Southwest Research Institute, principal investigator, $9,754. Logue will execute 100% of the budget (September 2017-August 2018).
- 鈥淪ecurity Printing and Anti-Counterfeiting Technology Center: A Unique Opportunity for South Dakota,鈥 proposal for the SDBOR, 日本av视频 campus coordinator, $900,000. Logue oversees 33% ($300,000) of the budget and will directly execute approximately 25% of the proposed budget (January 2014-2016).
- 鈥淭he Analysis of Cyanide and Emerging Cyanide Therapeutics (in Combination and Alone),鈥 proposal for DoD/NIH, principal investigator, $370,000 plus $85,000 in in-kind funding (March 2016). Logue will execute 100% of the budget (September 2014-2016).
- 鈥淩EU Site: Security Printing and Anticounterfeiting Technology,鈥 NSF, 日本av视频 campus coordinator, $74,128 of $453,323 total project. Logue oversees 16% of the total SPACT Research Experiences for Undergraduates budget (March 2013-2016).
- 鈥淕as Phase Processing for Low Cost Dye Solar Cells,鈥 NSF, co-principal investigator (with Mahdi Baroughi (principal investigator) and Matt Biesecker), $452,779 (October 2011-2014).
- 鈥淩apid Field-Usable Cyanide Sensor Development for Blood and Saliva,鈥 proposal for DoD/NIH, principal investigator, $400,000. Logue will execute 100% of the budget (September 2012-2014).
- "Enhancements of Raman Detection Minerals and Biomarkers Using Advanced Plasmonic Nanomaterials," NASA EPSCoR, co-principal investigator/campus coordinator, $172,501 of $1,125,000 (2010-2013).
- "The Analysis of 3-Mercaptopyruvate for a Sulfanegen Pharmacokinetic Study in Rabbits," University of Minnesota Center for Drug Design Contract, principal investigator, $12,840 (September 2013-April 2014).
- "NSF-EPSCOR South Dakota, Photoactive Nanoscale Systems Research," NSF EPSCOR, key contributor and grand opportunity leader, approximately $250,000 of $20,000,000 (2009-2014).
- "LCMSMS Analysis of 3-Mercaptopyruvate," contract with the University of Minnesota associated with DoD/NIH U01 funding, principal investigator, $9,564 (October 2012-January 2013).
- "Cyanide Diagnostics: Development of a Second-Generation Fluorometric Sensor for Rapid Analysis of Cyanide Exposure and Verification of the Inability of 2-Amino-2-Thiazoline-4-Carboxylic Acid (ATCA) to Act as a Diagnostic Marker," proposal for DoD/NIH, principal investigator, $254,290 (September 2011-2012).
- "MRI: Acquisition of an Ultra High Performance Liquid-Chromatography Tandem Mass-Spectrometer for a Multiuser Core Mass-Spectrometry Facility," NSF, principal investigator, $789,467 (2009-2012).
- "Analysis of CBRN Filter Devices," DOD/3M, principal investigator, $324,254 (2010-2011). Original funding was $250,076. Two funding supplements (contract modifications) were granted after successful development of novel methods for filter analysis.
- "Cyanide Diagnostics: Assessment of 2-Amino-2-Thiazoline-4-Carboxylic Acid as a Diagnostic Marker and Development of a Fluorometric Sensor for Rapid Analysis of Cyanide Exposure," NIH/DOD (ORISE), principal investigator, $235,938 (2010-2011).
- "Evaluation of Cyanide and Its Metabolites for Rapid Diagnosis of Cyanide Exposure," NIH/DOD, principal investigator, $447,298 (2008-2010).
- "Retrospective Analysis of Chemical Warfare Agent Metabolites in Hair," DoD Medical Chemical Program, principal investigator, $376,141 (2007-2010).
- "NSF-EPSCOR South Dakota, Photoactive Nanoscale Systems Research," NSF EPSCOR, key contributor and grand opportunity leader, approximately $200,000 of $6,750,000 (2006-2009).
- "Evaluation of Cyanide and Its Metabolites for Rapid Diagnosis of Cyanide Exposure," NIH/DOD, principal investigator, $158,117 (2007-2008).
- "Acquisition of a Femtosecond Fluorescence Upconversion System," NSF, co-principal investigator, $242,285 (2007-2008).
- "Surface-Enhanced Raman Spectroscopy of Cyanide and Its Metabolites for Rapid Diagnosis of Cyanide Exposure" modification to "Analysis of the Cyanide Metabolite 2-Aminothiazoline-4-Carboxylic Acid in Fish Tissue and Biological Matrices," U.S. Army Medical Research Institute of Chemical Defense, principal investigator, $169,791 (2006-2007).
- "Proposal for Graduate Research Assistant on CAAN Project: Molecular Beacon Based Electrochemical Nanosensor for Analysis of Target DNA," Center for Accelerated Application at the Nanoscale, principal investigator, $9,800 (2007).
- "Acquisition of Major Research Instrumentation for Fabrication and Characterization of Micro and Nanostructures for Sensing," NSF MRI, co-principal investigator, $252,000 (2005-2006).
- "Analysis of the Cyanide Metabolite 2-Aminothiazoline-4-Carboxylic Acid in Fish Tissue and Biological Matrices," U.S. Army Medical Research Institute of Chemical Defense, principal investigator, $63,581 (2005-2006).
- "Proposal for Continued Funding on CAAN project: Molecular Beacon Based Electrochemical Nanosensor for Analysis of Target DNA," Center for Accelerated Application at the Nanoscale, principal investigator, $29,615 (2006-2007).
- "Analysis of Sulfur Mustard Metabolites in Hair for Verification of Chemical Warfare Agent Exposure," 日本av视频 Research Support Fund, $7,000 with $2,500 match from the Department of Chemistry and Biochemistry and a $5,000 in-kind match from the U.S. Army Medical Research Institute of Chemical Defense, principal investigator, total: $14,500 (2005-2006).
- "Research Work Plan: Molecular Beacon Based Electrochemical Nanosensor for Analysis of Target DNA," Center for Accelerated Application at the Nanoscale, principal investigator, $5,040 (2005).
- "Brian Logue: Objectives and Allocation of Time to the Center for Accelerated Applications at the Nanoscale," Center for Accelerated Application at the Nanoscale, principal investigator, $5,151 (2005).
- "Evaluation of the Cyanide Metabolite, 2-Aminothiazoline-4-Carboxylic acid in Biological Matrices for Determination of Past Exposure to Cyanide," U.S. Army Medical Research Institute of Chemical Defense, principal investigator, $48,000 (2004-2005).
- "DEPSCoR Travel Funding for Travel to the U.S. Army Medical Research Institute of Chemical Defense," $2,024 from EPSCoR (2005).